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INSTALLATION

Terminal tools (complete)Connect MCPVS Code Marketplace extensionCLI (no AI agent)CLI init (first run)CLI account & logoutNPX (Recommended)Test Pulse (check test)Test Pulse commandsProject MemorySupply Pulse (supply)Supply Pulse commandsTerminal CLI referenceWeb Terminal (dashboard)Command CompassCLI commandsCLI in DockerCLI: All editors (one command)CLI: Crush, Hermes, ChatGPT, KiloOAuth & HTTP setupInstall overviewHTTP APISetup WalkthroughHTTP vs stdio

API & KEYS

API Key ManagementKey Naming & FormatAuthenticationKey Dashboard

CONFIGURATION

Universal RequirementsSupported EditorsHow It WorksArchitectureCLAUDE.md TemplateAGENTS.md Template

EDITORS28 guides

Supported EditorsVS CodeVS Code extension (Marketplace)Claude CodeCursorWindsurfJetBrains

PLATFORM

macOSWindowsLinux

TOOLS10 tools

Capabilities OverviewTools OverviewTool FilteringTool Workflowsget_project_contextread_codefind_codecheck_packageexplain_architectureZephex_dev_infocheck_testaudit_headerskeep_thinkingproject_memory

GUIDES

Best PracticesToken EfficiencyUse CasesZephex vs Local MCPZephex vs Context7Zephex vs GitHub MCPZephex vs SmitheryMCP EcosystemMarkdown Access

SUPPORT

Help CenterMCP troubleshootingTeam rolloutFAQConnection IssuesRate LimitsDowntime & ErrorsBillingTier GuidePro & Max guideUsage LimitsUsage Analytics

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API Reference

Complete API documentation

Troubleshooting

Common issues and solutions

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Editor and CLI integrations

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Editor setup

Roo Code MCP Server

Add Zephex to .roo/mcp.json at your workspace root (or Roo’s global MCP settings). Zephex uses streamable-http to https://zephex.dev/mcp — internet required, no npx.

Official Roo Code MCP documentation: Roo Code MCP docs

MCP endpointhttps://zephex.dev/mcp
AuthenticationAuthorization: Bearer mcp_sk_...
Config file.roo/mcp.json

Why Zephex

Without MCP, your agent guesses project layout and misses supply-chain risk. Zephex connects one hosted endpoint so every session gets the same ten tools — no per-machine npm installs, no version drift across the team.

Before you start

  • Roo Code extension installed in VS Code.
  • A Zephex API key from Dashboard → API Keys.
  • Workspace opened at the repo root where .roo/ lives.
  • Network access to https://zephex.dev/mcp.

Get and paste your API key

HTTP and stdio setups both need a key from your Zephex dashboard. OAuth-only flows (ChatGPT, Claude.ai web) sign you in in the browser instead — skip this section for those.

  1. Sign in at zephex.dev → Dashboard → API Keys (or /dashboard/api-keys).
  2. Click Create API key, give it a name you will recognize (e.g. "Kilo — work laptop"), then create.
  3. Copy the key as soon as it appears — Zephex only shows the full secret once. It starts with mcp_sk_ or a newer mcp_prod_… format.
  4. Paste into your config: either only the key in an env field (ZEPHEX_API_KEY), or the full HTTP header value Authorization: Bearer YOUR_KEY — match what your editor’s form asks for.
  5. Do not wrap the key in extra quotes inside JSON unless the file already quotes other string values.
  6. Never commit API keys to git. Revoke and create a new key in the dashboard if one leaks.

Setup policy for Roo Code

Matches the published CLI (mcp-proxy/src/commands/setup.ts). One command signs you in, writes the correct transport, and verifies 10 tools.

Recommended commandnpx -y zephex setup --roo
Project-scopednpx -y zephex setup --roo --project
Transportstdio (npx -y zephex + ZEPHEX_API_KEY)
Config parent keymcpServers

Global vs project config

  • Roo reads .roo/mcp.json at project root — run setup --roo from the repo you want connected.

After setup

  • Roo Code reads .roo/mcp.json — setup writes stdio npx zephex so repo tools can read your workspace.
  • Fully quit the editor after setup — reload window alone is often not enough.
  • Start a new agent/chat session so MCP tools register.

Account teardown: logout vs disconnect · Connect MCP walkthrough

Find where setup wrote your config

Search docs for “where is my MCP file” — the answer is always: run list first, then open the path it prints.

  1. Project: .roo/mcp.json (stdio mcpServers).
  2. Also check VS Code globalStorage roo mcp_settings.json if you previously used global Roo config.

Documented paths: <project>/.roo/mcp.json (project root)

Fastest install

Roo Code reads .roo/mcp.json — setup writes stdio npx zephex so repo tools can read your workspace.

Guided install (matches published CLI)

Runs the same code as mcp-proxy/src/commands/setup.ts — OAuth in browser, creates a CLI key, writes your editor config, verifies tools.

shell
npx -y zephex setup --roo

Already have a key?

Skip browser OAuth — paste a key from zephex.dev/dashboard/keys. Must start with mcp_prod_, mcp_dev_, or mcp_sk_.

shell
npx -y zephex setup --roo --api-key mcp_prod_your-key-here

What setup writes

Project .roo/mcp.json — run from your repo root: Transport: stdio (see <project>/.roo/mcp.json (project root)).

json
{  "mcpServers": {    "zephex": {      "command": "npx",      "args": ["-y", "zephex"],      "env": {        "ZEPHEX_API_KEY": "mcp_sk_your_key_here"      }    }  }}

After CLI install, fully restart the app if tools do not appear. Manual JSON/TOML blocks below are equivalent — use them when CLI commands are unavailable.

Hosted HTTP vs npx stdio

  • Recommended: npx -y zephex setup --roo — Roo Code reads .roo/mcp.json — setup writes stdio npx zephex so repo tools can read your workspace.
  • Config path: <project>/.roo/mcp.json (project root)
  • Manual stdio shape: command "npx", args ["-y","zephex"], env ZEPHEX_API_KEY (parent key: mcpServers).
  • Optional hosted HTTP (https://zephex.dev/mcp + Bearer) only if you do not need automatic workspace file access — pass github: URLs in prompts.
  • Never keep two zephex entries (stdio + HTTP) in the same config — pick one transport.
  • Cloud-only tools (check_package, project_memory, audit_headers, keep_thinking, Zephex_dev_info) work on both transports.
  • Repo tools (get_project_context, read_code, find_code, explain_architecture, check_test) need either stdio/npx setup or an explicit github:owner/repo or absolute path on HTTP.

Full comparison: HTTP vs stdio · npx zephex reference

How to connect Zephex

  1. Copy your Zephex API key from the dashboard.
  2. Create .roo/mcp.json in the project root if it does not exist.
  3. Paste the mcpServers block below. Replace the Bearer placeholder.
  4. Set disabled to false.
  5. VS Code → Developer: Reload Window.
  6. Open Roo Code and confirm zephex in MCP settings.
  7. New Roo task: test check_package then get_project_context.

Configuration

Replace mcp_sk_your_key_here with your key from Dashboard → API Keys. Copy the full key once at creation — paste into Authorization: Bearer … for HTTP configs, or into ZEPHEX_API_KEY for stdio/npx configs.

Remote server connection

Required type: "streamable-http". Do not use command/npx for Zephex.

json
{  "mcpServers": {    "zephex": {      "type": "streamable-http",      "url": "https://zephex.dev/mcp",      "headers": {        "Authorization": "Bearer mcp_sk_your_key_here"      },      "disabled": false    }  }}

Tip

Project .roo/mcp.json overrides global Roo MCP — edit the file Roo actually loads for this workspace.

Verify, repair, disconnect (CLI)

Run these in a terminal when the editor UI is unclear — catches stale npm, wrong transport, and project shadows.

shell
npx -y zephex@latest listnpx -y zephex@latest doctornpx -y zephex@latest repair# Fully quit the editor (Cmd+Q / Alt+F4), reopen, start a new agent session

Repair policy

  • npx -y zephex@latest repair pins stdio to zephex@latest, fixes OpenCode command-array shape, and adds PATH hints for GUI-launched apps.
  • repair migrates legacy HTTP → stdio for filesystem editors — not for Cursor, Claude Code global HTTP, or Crush.

Disconnect & skills

  • disconnect --<editor> removes Zephex from config files the CLI knows about and revokes the API key found in those files.
  • There is no disconnect --project flag — disconnect checks both global and project paths (project paths use your current terminal cwd).
  • Terminal-only sign-out: mcpcli logout (editors unchanged). Full teardown: mcpcli logout --all.
  • This editor: mcpcli disconnect --roo
  • Fresh OAuth: mcpcli reconnect --roo
  • Add agent guidance: mcpcli setup --roo --with-skill or mcpcli skills --<editor>.
  • Remove skills from one editor: mcpcli reset --roo (disconnect + skill files).
  • Remove all skill copies: mcpcli skills --remove.

Check that it works

After saving your config, confirm Zephex is connected before you rely on it in real work.

  1. Roo MCP UI shows zephex connected.
  2. Agent: “Use check_package on express.”
  3. “Use get_project_context on this workspace.”

Common searches

Questions people ask when Roo Code does not show Zephex tools — indexed for docs search.

How do I connect Zephex to roo-code?

Fastest: npx -y zephex setup --roo (browser sign-in, writes config, verifies 10 tools). Or paste manual config on this page, save, fully quit the app, reopen.

Where did setup save my roo-code MCP config?

Run npx -y zephex@latest list — it prints every config path on this machine that references Zephex.

roo-code works in terminal but not in the editor

GUI apps often lack nvm/fnm PATH. Run npx -y zephex@latest repair, ensure Node is on system PATH, fully quit the editor.

How do I disconnect Zephex from roo-code?

mcpcli disconnect --roo — revokes key and strips config.

Example ways to use the tools

You do not call tools yourself — ask your agent in plain language. Try these once Zephex is connected:

“Roo Code: check_package task=upgrade from our locked vite version to latest 6.x — breaking changes first.”

Upgrade brief before Roo edits config and plugins.

“get_project_context on .roo/mcp.json project — monorepo or single package?”

Clarifies which package.json Roo should treat as primary.

“read_code the zod schema for UserInput in packages/shared.”

Shared-package symbol read without opening the whole package.

“check_package on a dependency Roo is about to add via auto-approve.”

Safety pause before automatic install.

“audit_headers on our customer admin portal URL.”

Admin surface header audit from Roo chat.

“keep_thinking while Roo fixes a flaky Playwright test — track attempts.”

Avoids retry loops in long Roo tasks.

Which tools need your project path?

Roo autonomous mode: .roo/mcp.json at workspace root — paste github: URLs for repos not opened as the VS Code folder.

Need a repo or folder path

  • get_project_context — full stack snapshot for one repo
  • read_code — read functions/classes by symbol name
  • find_code — search definitions and usages
  • explain_architecture — Mermaid diagrams for the repo
  • check_test — minimal file list for a task you describe

Work without a local project

  • check_package — npm/PyPI/Cargo/Go registry safety (no repo path)
  • project_memory — Cross-session project memory: remember decisions, gotchas, goals, conventions across sessions via local SQLite (stdio only).
  • audit_headers — security grade for any HTTPS URL you own or may test
  • keep_thinking — structured debugging notes across steps
  • Zephex_dev_info — vetted patterns (auth, DB, deploy, etc.)

How to tell the agent where the code lives

  • GitHub (no clone required): say github:owner/repo — example: github:vercel/next.js
  • Local folder: give the absolute path to the project root (the folder that contains package.json, pyproject.toml, or go.mod).
  • If your editor already has the repo open, try “use get_project_context on this workspace” first; if the tool returns empty, repeat with the full path or github: URL in the same chat.
  • For read_code / find_code, name the symbol or search term in the same message as the path (e.g. “find_code AuthService in github:myorg/api”).

macOS and Windows paths

  • macOS example path: /Users/yourname/Developer/my-app
  • Windows example path: C:\Users\yourname\projects\my-app
  • Replace yourname with your Mac or Windows login — the agent cannot guess your home directory.
  • Cloud-only tools (check_package, audit_headers) never need your username or project folder.

When Zephex will not connect

These situations usually mean the setup cannot work until you fix the underlying issue:

  • No internet or a firewall blocks outbound HTTPS to zephex.dev (port 443).
  • API key never created, revoked, or pasted incorrectly (missing Bearer , extra quotes, or truncated copy).
  • Wrong MCP URL — must be exactly https://zephex.dev/mcp (not /docs, not /api, no wrong host).
  • Mixed stdio + HTTP — two zephex entries (npx and url) confuse many clients; keep one transport.
  • Corporate proxy strips Authorization headers or chunked transfer encoding.
  • Monthly request limit reached on the Free plan (555 requests/month) — tools stop until next cycle, share for bonus requests, or upgrade.
  • Editing the wrong config file — global vs project-level paths differ by editor and OS.
  • App not fully quit after save — MCP often loads only on a cold start (especially IDEs).
  • Tools connect but return “no project” — not a connection failure; add github:owner/repo or an absolute path (see tool usage section).
  • stdio command block still present alongside remote config.
  • disabled: true in JSON.
  • Edited global MCP while project .roo/mcp.json overrides.

If something goes wrong

No zephex in Roo

File must be .roo/mcp.json at workspace root with mcpServers wrapper.

0 tools

Use streamable-http + url, not command. Reload VS Code.

Auth failed

Authorization: Bearer <full key> in headers.

Wrong repo context

Not a connection issue — add github:owner/repo or absolute path in the prompt.

Legacy npx still runs

Delete command/args/env stdio entry for zephex.

Still stuck? Quickstart · MCP troubleshooting

Tools included with Zephex

Roo reads .roo/mcp.json — ten hosted tools for autonomous modes:

  • get_project_context

    Reads your project structure, dependencies, scripts, env vars, and framework markers in one call. Replaces manually opening package.json, tsconfig, and multiple config files at the start of every session.

  • read_code

    AST-based code extraction: pass a symbol name and get the implementation without reading entire files. Supports symbol lookup, batched file reads, and structural outlines for large files.

  • find_code

    Ranked search across the repo for definitions, usages, and patterns. Faster than blind grep when the agent does not know where a symbol lives.

  • check_package

    Live registry lookup for npm, PyPI, Cargo, and Go modules. Surfaces typosquat risk, maintainer changes, and suspicious version jumps before you run install.

  • explain_architecture

    Generates Mermaid diagrams for auth flows, service boundaries, and module dependencies so the agent reasons about structure instead of guessing.

  • check_test

    Turns a task description into the smallest file set to read or edit, with risk ratings and caller impact notes.

  • audit_headers

    Grades a deployed URL for CSP, HSTS, TLS, cookies, and redirects. Returns fix snippets for common hosts (Vercel, Cloudflare, Nginx).

  • keep_thinking

    Structured multi-step debugging: tracks hypotheses and conclusions so long investigations do not loop.

  • Zephex_dev_info

    Expert patterns for authentication, databases, frontend frameworks, deployment, and mobile stacks when the agent needs vetted guidance.

  • project_memory

    Persists decisions, gotchas, and conventions per project in ~/.zephex/memory (SQLite FTS5). recall before unfamiliar areas; remember after discoveries. Local stdio only on npx zephex.

Related

  • Cline MCP setup
  • Kilo Code MCP setup
  • Quickstart — create your first API key
  • HTTP vs stdio — which to use
  • npx zephex setup commands
  • MCP troubleshooting
  • All supported editors
  • All 10 MCP tools
  • Install wizard
  • Pricing and limits